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store standard error with phenotypic data

Open lukasmueller opened this issue 1 year ago • 4 comments

Expected Behavior

  • add a new field to phenotype table?
  • store as phenotypeprop

For Bugs:

Environment

Steps to Reproduce

lukasmueller avatar Jul 28 '22 15:07 lukasmueller

Naama to request change in phenotype table from Chado project

lukasmueller avatar Sep 22 '22 15:09 lukasmueller

https://github.com/GMOD/Chado/issues/135

nmenda avatar Sep 22 '22 16:09 nmenda

https://github.com/GMOD/Chado/issues/135#issuecomment-1265735759

this raises a good question - do we intend to store stderr as a single value or indicate how it was calculated too?

if the latter then phenotypeprop would be the way to go I think

nmenda avatar Oct 04 '22 16:10 nmenda

will try to use phneotypprop. Need to add new system cvterms for the Stderr methods of measurement

nmenda avatar Oct 06 '22 15:10 nmenda

How far has this been implemented? I think adding the cvterms for error and type should be straightforward... maybe we need to discuss in the lab meeting?

lukasmueller avatar May 18 '23 14:05 lukasmueller

closed with #4679

nmenda avatar Oct 02 '23 15:10 nmenda