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AlphaFold2_batch hangs at 'Install dependencies'

Open parksjm opened this issue 2 years ago • 0 comments

Expected Behavior

I expect to see that ColabFold and other dependencies are being installed.

Current Behavior

No change after several minutes. Just a spinning wheel. I am connected to a V100 high-RAM machine. No progress, but still consuming my resources.

Steps to Reproduce (for bugs)

Please make sure to reproduce the issue after a "Factory Reset" in Colab. If running locally update your local installation colabfold_batch to the newest version. Please provide your input if you can share it.

I reproduced this issue on two different days. I tried restarting the runtime more than once. Google Drive was successfully mounted, so that is not the issue.

ColabFold Output (for bugs)

Please make sure to also post the complete ColabFold output. You can use gist.github.com for large output.

Context

Providing context helps us come up with a solution and improve our documentation for the future.

Your Environment

Include as many relevant details about the environment you experienced the bug in.

  • Git commit used
  • If you run it on a local system. Please add the server specifications
  • Operating system and version:

I tried both Chrome and Safari browsers. Both gave the same behavior.

parksjm avatar Aug 04 '23 16:08 parksjm