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Cannot connect to a high RAM runtime even with 544 compute units

Open RobinGanesan opened this issue 2 years ago • 3 comments

Expected Behavior

should be able to connect to high RAM runtime resources notebook setting

Current Behavior

Will not connect me to a high RAM runtime; the same thing is happening for someone else in our lab with a Colab "pay as you go" subscription. We have successfully used Colabfold a few weeks ago. not using high RAM gpu not available

However, I went into "making the most of your Colab subscription and ran the same code and got connected to a high RAM runtime making the most

Steps to Reproduce (for bugs)

Please make sure to reproduce the issue after a "Factory Reset" in Colab. If running locally ypdate you local installation colabfold_batch to the newest version. Please provide your input if you can share it.

ColabFold Output (for bugs)

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Context

Providing context helps us come up with a solution and improve our documentation for the future. I'm running the notebook in this link https://colab.research.google.com/github/sokrypton/ColabFold/blob/main/AlphaFold2.ipynb#scrollTo=mbaIO9pWjaN0

Your Environment

Include as many relevant details about the environment you experienced the bug in.

  • Git commit used
  • If you run it on a local system. Please add the server specifications not being run on a local system
  • Operating system and version: Windows 10 pro version 22H2, 64 bit

RobinGanesan avatar Jun 14 '23 11:06 RobinGanesan

This appears to be a google colab issue... The new default is high-memory and A100 GPU (currently in high demand and unavailable). To fix this issue, you'd need to downgrade the GPU from A100->V100->T4.

I've updated the notebook to force the default to be low-mem and T4.

sokrypton avatar Jun 14 '23 11:06 sokrypton

Thanks, Sergei. Unfortunately, this setting does not allow me to complete my structure prediction. What else can I do? crash

RobinGanesan avatar Jun 14 '23 12:06 RobinGanesan

Try increase to high-memory but keep GPU at V100 or T4

sokrypton avatar Jun 14 '23 12:06 sokrypton