hh-suite
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Database pdb.hhm not availabe
I installed hh-suite with conda and followed the instructions on your github pages. I have troubles to start hhpred as it is constantly searching for the pdb.hhm (in different variations/endings) databases. As requested in the README/installation file of hhpred I tried to create a catenated pdb.hhm file, but the mentioned command (cat ../*.hmm > pdb.hhm) was not executable as there were no files ending with *.hhm in the database download. The downloaded databases only included the pdb70 files in several variations. Is there any databases that I might have not downloaded?