hh-suite
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alignment file error
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Expected Behavior
hhmakemodel.py is giving the not giving correct alignment file.
"Error while using alignment file generated by hhmakemodel.py" return f(self.modpt, io.modpt, self.env.libs.modpt, eqvdst) _modeller.ModellerError: rdmmcif_303E> No atoms were read from the specified input MMCIF file, since the starting residue number and/or chain id in MODEL_SEGMENT (or the alignment file header) was not found; requested starting position: residue number " 1", chain " A"; atom file name: 2G0D.cif
Steps to Reproduce (for bugs)
while I used TvLDH fasta given the correct alignment , and modeller was able to model the structure
HH-suite Output (for bugs)
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Context
\While I have taken other sequence the alignment file is incorrect.
Your Environment
Include as many relevant details about the environment you experienced the issue in.
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I am running the hhpred standalone and trying to model the protein using ,modeller. But I think there is issue in generating alignment file