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mmseqs taxonomy - see best hits used by lca

Open atoselan opened this issue 1 year ago • 0 comments

Hi,

Is it possible to see all the hits (seq id, e-val etc.) for a query sequence that are used to inform the lca? I have some hits to the taxonomic level 'root' that seem to to be clearly from a particular taxa when I blast them against NR and I'd like to see in more detail what's going on in the lca stage of mmseq taxonomy.

Cheers, Andrew

atoselan avatar May 12 '23 13:05 atoselan