Spencer Nystrom

Hi @cparsania the `conda` version of the meme suite tools is not supported by the MEME Suite authors. And in fact, the tool has several known bugs. One of the...

Interesting. If you rerun and set `outdir = "dreme_test/"` (or some other directory on your filesystem), can you go `ls dreme_test/` at the commandline and tell me the outputs there?...

@HDash thanks for the note. I can add this to the FAQ, however, I'm not convinced this solves it in all cases. For example, the conda install I think is...

Yeah for sure, I believe this is the fix for non-conda installs. If this solves it for the conda install too that would be awesome, but I think in general...

Hi Dan, Sorry for just now seeing this issue, I was sick the week you reported & this slipped through the cracks! Would you mind sharing how you installed the...

Hi Qianzhao, Unfortunately, the `conda` install of the Meme suite is known to be broken. I do not maintain that and haven't looked into fixing it. Usually these kinds of...

~Can you share which meme version you are running? There may have been a change to default arguments or something in the cli.~

Oh, actually. This isn't really a "bug" per-se, but a documented requirement. I should add a better warning message, though. see the [runMeme docs](https://snystrom.github.io/memes-manual/reference/runMeme.html) > **control** any data type as...

If you'd like to add extra docs, I'd happily consider a PR. I also sketched out a fix over at [5c2079e](https://github.com/snystrom/memes/commit/5c2079e9e23d83cfb6946138755ba47c983780b3) that I can test & finish tonight.

Currently fails giving a cryptic error with column selection.