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Published 20 hours ago • verified publisher icon snakemake-workflows

TODO

Open johanneskoester opened this issue 6 years ago • 0 comments

This workflow shall be extended as new types of analyses emerge. Please feel free to contribute or suggest further items to be added.

  • [ ] Add kallisto-based step for calculating per-cell abundances, also considering UMIs.
  • [ ] infer trajectories with STREAM
  • [ ] cluster with SC3
  • [ ] infer RNA velocity with velocyto

johanneskoester avatar May 29 '18 13:05 johanneskoester