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Published 20 hours ago • verified publisher icon snakemake-workflows

snpeff with custom genome database

Open RvV1979 opened this issue 5 years ago • 0 comments

I wish to apply this workflow to a non-model plant genome for which no reference is readily available at the snpEff database. Is there a way to direct snpEff to a genbank accession or, alternatively, a custom snpEff annotation database? Thanks for your advice

RvV1979 avatar Sep 12 '19 13:09 RvV1979