Steffen Möller

--- grabix-0.0~git20130718.orig/Makefile +++ grabix-0.0~git20130718/Makefile @@ -1,2 +1,7 @@ +LDFLAGS+= -lstdc++ -lz +CFLAGS+=-Wall all: - gcc -Wall -O2 -o grabix grabix.cpp bgzf.c -lstdc++ -lz - gcc $(CFLAGS) -o grabix grabix.cpp bgzf.c...

One of the bits created for the Debian package. Enjoy. Steffen .TH GRABIX 1 "July 18, 2013" .SH NAME grabix - program to do something .SH SYNOPSIS .B bgzip .RI...

Hello, It is a very non-scientific side issue, I know, but ... please kindly give it a spin. Steffen ``` W: nanosv: executable-not-elf-or-script usr/lib/python3/dist-packages/nanosv/bedfiles/human_hg19.bed W: nanosv: executable-not-elf-or-script usr/lib/python3/dist-packages/nanosv/config.ini ```

Hello, I saw 1.2.4 in the comment, but if you could formally tag the releases on github then this would give some extra confidence and help users to describe what...

Wenn seit vergangenem Jahr nichts mehr passiert ist, so kannst Du das gerne auch zusammenfassen.

salmon results show no gene names - with latest guix rnaseq 0.1

6

Hello, I read through https://github.com/BIMSBbioinfo/pigx_rnaseq/issues/35 but somehow, even though I am using your latest GUIX-version, the missing gene names affect me: ``` $ which pigx-rnaseq .../.guix-profile/bin/pigx-rnaseq $ pigx-rnaseq --version PiGx...

suggesting runtime tests

4

There should be some prior art on this somewhere on the Internet - https://www.nist.gov/programs-projects/genome-bottle comes to mind. But that is already about semantics. I thought it would possibly help if...

CI tests with Debian?

2

I do not really dare to ask, knowing how much you are investing into guix, but on the other hand, for the same reason you can also well estimate how...

``` $ nimble --verbose test Verifying dependencies for [email protected] Compiling /home/moeller/git/nim-team/nim-d3/nim-d3-0.1.3/tests/test1 (from package d3) using js backend Executing /usr/bin/nim js --noNimblePath -d:NimblePkgVersion=0.1.3 -r --path:. /home/moeller/git/nim-team/nim-d3/nim-d3-0.1.3/tests/test1 Hint: used config file '/etc/nim/nim.cfg'...