mzLib
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Chronologer Retention Time model predictor
This PR adds the Chronologer model and the weights from the article.
- https://www.biorxiv.org/content/10.1101/2023.05.30.542978v1
- https://github.com/searlelab/chronologer
Proteomics csporj file now contains a conditional installing statement for the operating system, this is to enable CUDA for compatible OS
Codecov Report
Attention: Patch coverage is 97.65101%
with 7 lines
in your changes missing coverage. Please review.
Project coverage is 75.69%. Comparing base (
71828ee
) to head (a99a4c4
).
Files with missing lines | Patch % | Lines |
---|---|---|
...rediction/ChronologerModel/ChronologerEstimator.cs | 96.68% | 5 Missing and 2 partials :warning: |
Additional details and impacted files
@@ Coverage Diff @@
## master #761 +/- ##
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+ Coverage 75.48% 75.69% +0.20%
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Files 201 203 +2
Lines 30857 31152 +295
Branches 3112 3137 +25
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+ Hits 23292 23580 +288
- Misses 7039 7044 +5
- Partials 526 528 +2
Files with missing lines | Coverage Δ | |
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...gmentation/Peptide/TerminusSpecificProductTypes.cs | 100.00% <ø> (ø) |
|
mzLib/Proteomics/Protein/Protein.cs | 95.70% <100.00%> (ø) |
|
...tionTimePrediction/ChronologerModel/Chronologer.cs | 100.00% <100.00%> (ø) |
|
...rediction/ChronologerModel/ChronologerEstimator.cs | 96.68% <96.68%> (ø) |