Support for pplacer refpkgs

[geronimp]

Hi Siavash,

First, the SEPP, TIPP, UPP and HIPPI suite look very interesting and I'm excited to try them out - SEPP in particular

I'm wondering if it would it be possible to add support for pplacer refpkgs rather than using RAxML_info files to set the pplacer parameters? I have pplacer refpkgs created with trees from FastTree and it would useful to able to work with these files directly.

Regards,

Joel

[smirarab]

Will look into it for SEPP in future versions (hopefully not too far in future).

On Mon, Apr 17, 2017 at 9:48 PM, geronimp [email protected] wrote:

Hi Siavash,

First, the SEPP, TIPP, UPP and HIPPI suite look very interesting and I'm excited to try them out - SEPP in particular

I'm wondering if it would it be possible to add support for pplacer refpkgs rather than using RAxML_info files to set the pplacer parameters? I have pplacer refpkgs created with trees from FastTree and it would useful to able to work with these files directly.

Regards,

Joel

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub https://github.com/smirarab/sepp/issues/17, or mute the thread https://github.com/notifications/unsubscribe-auth/AAybuP-cs5_wyWbXLf1MrgTD_Mnx3oxkks5rxECLgaJpZM4M_3eh .

-- Siavash Mirarab

[geronimp]

Okay, thanks Siavash