PlasFlow icon indicating copy to clipboard operation
PlasFlow copied to clipboard

Published 20 hours ago • verified publisher icon smaegol

filtering error

Open feilongzh opened this issue 2 years ago • 1 comments

(plasflow) [administrator@localhost ~]$ ./miniconda3/envs/plasflow/bin/filter_sequences_by_length.pl -input Citrobacter_freundii_strain_CAV1321_scaffolds.fasta -output firstplas.fasta Can't locate Bio/SeqIO.pm in @INC (@INC contains: /usr/local/lib64/perl5 /usr/local/share/perl5 /usr/lib64/perl5/vendor_perl /usr/share/perl5/vendor_perl /usr/lib64/perl5 /usr/share/perl5 .) at ./miniconda3/envs/plasflow/bin/filter_sequences_by_length.pl line 24. BEGIN failed--compilation aborted at ./miniconda3/envs/plasflow/bin/filter_sequences_by_length.pl line 24.

How to deal with it?Thanks

feilongzh avatar Feb 23 '22 08:02 feilongzh

export PERL5LIB=~/miniconda3/pkgs/perl-bioperl-1.6.924-4/lib/perl5/site_perl/5.22.0/:$PERL5LIB

Kyle-ssq avatar Mar 26 '22 04:03 Kyle-ssq