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Published 20 hours ago • verified publisher icon slowkoni

Haplotype order

Open JiawenChenn opened this issue 3 years ago • 1 comments

Hi,

I have been using RFmix for a while and it works really well. Just a quick question, in the output file, we will have samplename.1 and samplename.2 for haplotypes at one site. How does the result correspond to the original phased vcf file? If we have 0|1, does sample names.1 represents 0 and samplename.2 represents 1?

Thanks a lot for your help!!

JiawenChenn avatar Oct 29 '21 18:10 JiawenChenn

I had the exact same question. Were you ever able to figure this out?

mmcqui avatar Aug 08 '22 14:08 mmcqui