pypolyagamma
pypolyagamma copied to clipboard
Published
20 hours ago •
slinderman
slinderman
Problems installing
I get the following problem when trying to install:
gamma.c
deps/gsl/cdf/gamma.c(24): fatal error C1083: Cannot open include file: 'config.h': No such file or directory
Any idea on how to solve this? I didn't experience this problem a while back (~1.5 years ago) when I installed it then.
Here's the full output:
PS C:\Work> py -m pip install pypolyagamma==1.2.2
Collecting pypolyagamma==1.2.2
Using cached pypolyagamma-1.2.2.tar.gz (233 kB)
Preparing metadata (setup.py) ... done
Requirement already satisfied: numpy in c:\users\david\appdata\local\programs\python\python38\lib\site-packages (from pypolyagamma==1.2.2) (1.24.3)
Requirement already satisfied: scipy in c:\users\david\appdata\local\programs\python\python38\lib\site-packages (from pypolyagamma==1.2.2) (1.10.1)
Requirement already satisfied: matplotlib in c:\users\david\appdata\local\programs\python\python38\lib\site-packages (from pypolyagamma==1.2.2) (3.7.2)
Requirement already satisfied: contourpy>=1.0.1 in c:\users\david\appdata\local\programs\python\python38\lib\site-packages (from matplotlib->pypolyagamma==1.2.2)
(1.1.0)
Requirement already satisfied: cycler>=0.10 in c:\users\david\appdata\local\programs\python\python38\lib\site-packages (from matplotlib->pypolyagamma==1.2.2) (0.
11.0)
Requirement already satisfied: fonttools>=4.22.0 in c:\users\david\appdata\local\programs\python\python38\lib\site-packages (from matplotlib->pypolyagamma==1.2.2
) (4.42.0)
Requirement already satisfied: kiwisolver>=1.0.1 in c:\users\david\appdata\local\programs\python\python38\lib\site-packages (from matplotlib->pypolyagamma==1.2.2
) (1.4.4)
Requirement already satisfied: packaging>=20.0 in c:\users\david\appdata\local\programs\python\python38\lib\site-packages (from matplotlib->pypolyagamma==1.2.2)
(23.1)
Requirement already satisfied: pillow>=6.2.0 in c:\users\david\appdata\local\programs\python\python38\lib\site-packages (from matplotlib->pypolyagamma==1.2.2) (1
0.0.0)
Requirement already satisfied: pyparsing<3.1,>=2.3.1 in c:\users\david\appdata\local\programs\python\python38\lib\site-packages (from matplotlib->pypolyagamma==1
.2.2) (3.0.9)
Requirement already satisfied: python-dateutil>=2.7 in c:\users\david\appdata\local\programs\python\python38\lib\site-packages (from matplotlib->pypolyagamma==1.
2.2) (2.8.2)
Requirement already satisfied: importlib-resources>=3.2.0 in c:\users\david\appdata\local\programs\python\python38\lib\site-packages (from matplotlib->pypolyagam
ma==1.2.2) (6.0.1)
Requirement already satisfied: zipp>=3.1.0 in c:\users\david\appdata\local\programs\python\python38\lib\site-packages (from importlib-resources>=3.2.0->matplotli
b->pypolyagamma==1.2.2) (3.15.0)
Requirement already satisfied: six>=1.5 in c:\users\david\appdata\local\programs\python\python38\lib\site-packages (from python-dateutil>=2.7->matplotlib->pypoly
agamma==1.2.2) (1.16.0)
Building wheels for collected packages: pypolyagamma
Building wheel for pypolyagamma (setup.py) ... error
error: subprocess-exited-with-error
× python setup.py bdist_wheel did not run successfully.
│ exit code: 1
╰─> [52 lines of output]
C:\Users\david\AppData\Local\Temp\pip-install-84w1rplz\pypolyagamma_7f6c58be6745434694645626cd477fa0\setup.py:6: DeprecationWarning: pkg_resources is depre
cated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html
import pkg_resources
'.' is not recognized as an internal or external command,
operable program or batch file.
make: *** No targets specified and no makefile found. Stop.
C:\Users\david\AppData\Local\Programs\Python\Python38\lib\site-packages\setuptools\dist.py:744: SetuptoolsDeprecationWarning: Invalid dash-separated option
s
!!
********************************************************************************
Usage of dash-separated 'description-file' will not be supported in future
versions. Please use the underscore name 'description_file' instead.
This deprecation is overdue, please update your project and remove deprecated
calls to avoid build errors in the future.
See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
********************************************************************************
!!
opt = self.warn_dash_deprecation(opt, section)
C:\Users\david\AppData\Local\Programs\Python\Python38\lib\site-packages\setuptools\_distutils\dist.py:265: UserWarning: Unknown distribution option: 'cmd_c
lass'
warnings.warn(msg)
running bdist_wheel
running build
running build_py
creating build
creating build\lib.win-amd64-cpython-38
creating build\lib.win-amd64-cpython-38\pypolyagamma
copying pypolyagamma\distributions.py -> build\lib.win-amd64-cpython-38\pypolyagamma
copying pypolyagamma\utils.py -> build\lib.win-amd64-cpython-38\pypolyagamma
copying pypolyagamma\__init__.py -> build\lib.win-amd64-cpython-38\pypolyagamma
running build_ext
building 'pypolyagamma.pypolyagamma' extension
creating build\temp.win-amd64-cpython-38
creating build\temp.win-amd64-cpython-38\Release
creating build\temp.win-amd64-cpython-38\Release\deps
creating build\temp.win-amd64-cpython-38\Release\deps\gsl
creating build\temp.win-amd64-cpython-38\Release\deps\gsl\cdf
creating build\temp.win-amd64-cpython-38\Release\deps\gsl\complex
creating build\temp.win-amd64-cpython-38\Release\deps\gsl\err
creating build\temp.win-amd64-cpython-38\Release\deps\gsl\randist
creating build\temp.win-amd64-cpython-38\Release\deps\gsl\rng
creating build\temp.win-amd64-cpython-38\Release\deps\gsl\specfunc
creating build\temp.win-amd64-cpython-38\Release\deps\gsl\sys
creating build\temp.win-amd64-cpython-38\Release\pypolyagamma
creating build\temp.win-amd64-cpython-38\Release\pypolyagamma\cpp
creating build\temp.win-amd64-cpython-38\Release\pypolyagamma\cpp\include
"C:\Program Files (x86)\Microsoft Visual Studio\2022\BuildTools\VC\Tools\MSVC\14.36.32532\bin\HostX86\x64\cl.exe" /c /nologo /O2 /W3 /GL /DNDEBUG /MD -Ipyp
olyagamma/cpp/include -Ideps/gsl -Ideps/gsl/gsl -IC:\Users\david\AppData\Local\Programs\Python\Python38\include -IC:\Users\david\AppData\Local\Programs\Python\Py
thon38\Include "-IC:\Program Files (x86)\Microsoft Visual Studio\2022\BuildTools\VC\Tools\MSVC\14.36.32532\include" "-IC:\Program Files (x86)\Microsoft Visual St
udio\2022\BuildTools\VC\Tools\MSVC\14.36.32532\ATLMFC\include" "-IC:\Program Files (x86)\Microsoft Visual Studio\2022\BuildTools\VC\Auxiliary\VS\include" "-IC:\P
rogram Files (x86)\Windows Kits\10\include\10.0.22000.0\ucrt" "-IC:\Program Files (x86)\Windows Kits\10\\include\10.0.22000.0\\um" "-IC:\Program Files (x86)\Wind
ows Kits\10\\include\10.0.22000.0\\shared" "-IC:\Program Files (x86)\Windows Kits\10\\include\10.0.22000.0\\winrt" "-IC:\Program Files (x86)\Windows Kits\10\\inc
lude\10.0.22000.0\\cppwinrt" /Tcdeps/gsl/cdf/gamma.c /Fobuild\temp.win-amd64-cpython-38\Release\deps/gsl/cdf/gamma.obj -w -DHAVE_INLINE
cl : Command line warning D9025 : overriding '/W3' with '/w'
gamma.c
deps/gsl/cdf/gamma.c(24): fatal error C1083: Cannot open include file: 'config.h': No such file or directory
error: command 'C:\\Program Files (x86)\\Microsoft Visual Studio\\2022\\BuildTools\\VC\\Tools\\MSVC\\14.36.32532\\bin\\HostX86\\x64\\cl.exe' failed with ex
it code 2
[end of output]
note: This error originates from a subprocess, and is likely not a problem with pip.
ERROR: Failed building wheel for pypolyagamma
Running setup.py clean for pypolyagamma
Failed to build pypolyagamma
ERROR: Could not build wheels for pypolyagamma, which is required to install pyproject.toml-based projects
Bumping this up. I also have the same issue, installing on windows.
× python setup.py bdist_wheel did not run successfully.
│ exit code: 1
╰─> [54 lines of output]
C:\Users\khan332\AppData\Local\Temp\pip-install-j7u98cga\pypolyagamma_5c7286f3f8864971a7a2b90673b61fb4\setup.py:6: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html
import pkg_resources
'.' is not recognized as an internal or external command,
operable program or batch file.
'make' is not recognized as an internal or external command,
operable program or batch file.
C:\Users\khan332\Anaconda3\envs\rslds\lib\site-packages\setuptools\dist.py:745: SetuptoolsDeprecationWarning: Invalid dash-separated options
!!
********************************************************************************
Usage of dash-separated 'description-file' will not be supported in future
versions. Please use the underscore name 'description_file' instead.
This deprecation is overdue, please update your project and remove deprecated
calls to avoid build errors in the future.
See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
********************************************************************************
!!
opt = self.warn_dash_deprecation(opt, section)
C:\Users\khan332\Anaconda3\envs\rslds\lib\site-packages\setuptools\_distutils\dist.py:265: UserWarning: Unknown distribution option: 'cmd_class'
warnings.warn(msg)
running bdist_wheel
running build
running build_py
creating build
creating build\lib.win-amd64-cpython-39
creating build\lib.win-amd64-cpython-39\pypolyagamma
copying pypolyagamma\binary_trees.py -> build\lib.win-amd64-cpython-39\pypolyagamma
copying pypolyagamma\distributions.py -> build\lib.win-amd64-cpython-39\pypolyagamma
copying pypolyagamma\utils.py -> build\lib.win-amd64-cpython-39\pypolyagamma
copying pypolyagamma\__init__.py -> build\lib.win-amd64-cpython-39\pypolyagamma
running build_ext
building 'pypolyagamma.pypolyagamma' extension
creating build\temp.win-amd64-cpython-39
creating build\temp.win-amd64-cpython-39\Release
creating build\temp.win-amd64-cpython-39\Release\deps
creating build\temp.win-amd64-cpython-39\Release\deps\gsl
creating build\temp.win-amd64-cpython-39\Release\deps\gsl\cdf
creating build\temp.win-amd64-cpython-39\Release\deps\gsl\complex
creating build\temp.win-amd64-cpython-39\Release\deps\gsl\err
creating build\temp.win-amd64-cpython-39\Release\deps\gsl\randist
creating build\temp.win-amd64-cpython-39\Release\deps\gsl\rng
creating build\temp.win-amd64-cpython-39\Release\deps\gsl\specfunc
creating build\temp.win-amd64-cpython-39\Release\deps\gsl\sys
creating build\temp.win-amd64-cpython-39\Release\pypolyagamma
creating build\temp.win-amd64-cpython-39\Release\pypolyagamma\cpp
creating build\temp.win-amd64-cpython-39\Release\pypolyagamma\cpp\include
"C:\Program Files (x86)\Microsoft Visual Studio\2019\Enterprise\VC\Tools\MSVC\14.28.29910\bin\HostX86\x64\cl.exe" /c /nologo /O2 /W3 /GL /DNDEBUG /MD -Ipypolyagamma -Ipypolyagamma/cpp/include -Ideps/gsl -Ideps/gsl/gsl -IC:\Users\khan332\Anaconda3\envs\rslds\include -IC:\Users\khan332\Anaconda3\envs\rslds\Include "-IC:\Program Files (x86)\Microsoft Visual Studio\2019\Enterprise\VC\Tools\MSVC\14.28.29910\ATLMFC\include" "-IC:\Program Files (x86)\Microsoft Visual Studio\2019\Enterprise\VC\Tools\MSVC\14.28.29910\include" "-IC:\Program Files (x86)\Windows Kits\NETFXSDK\4.8\include\um" "-IC:\Program Files (x86)\Windows Kits\10\include\10.0.19041.0\ucrt" "-IC:\Program Files (x86)\Windows Kits\10\include\10.0.19041.0\shared" "-IC:\Program Files (x86)\Windows Kits\10\include\10.0.19041.0\um" "-IC:\Program Files (x86)\Windows Kits\10\include\10.0.19041.0\winrt" "-IC:\Program Files (x86)\Windows Kits\10\include\10.0.19041.0\cppwinrt" /Tcdeps/gsl/cdf/gamma.c /Fobuild\temp.win-amd64-cpython-39\Release\deps/gsl/cdf/gamma.obj -w -DHAVE_INLINE
cl : Command line warning D9025 : overriding '/W3' with '/w'
gamma.c
deps/gsl/cdf/gamma.c(24): fatal error C1083: Cannot open include file: 'config.h': No such file or directory
error: command 'C:\\Program Files (x86)\\Microsoft Visual Studio\\2019\\Enterprise\\VC\\Tools\\MSVC\\14.28.29910\\bin\\HostX86\\x64\\cl.exe' failed with exit code 2
[end of output]
