Sjoerd de Vries

See tests/highlevel/environment0.py Now, an extra `translate()` is required.

Right now, highlevel Modules need a Context to be effective. This might be lifted so that they can be used more elegantly in DirectTransformer objects. Needs a way to deal...

build-rotamers-command in crocodile shows some potential bugs for status monitoring. Verify that they are still there, then fix them

Tested on an irreproducible bin/seamless command. For once, it seems to require --fingertip as well. For another, the unbashify copy is not undone, and still causes a cache hit.

Right now, there is only "members", and this is not used at all (obsoleted code?). Once the integration is complete, add buffer_info fields: - is_deep : true if the buffer...

When submitting thousands of jobs, there could be many `/bin/seamless` processes running. Right now, this runs into two bottlenecks (see `tests/cmd/manyjobs.sh` for the code): - `/bin/seamless` imports `seamless`, which takes...

Store Transformer exceptions in database

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But think about exception type! Only store reproducible exceptions. MemoryError should not be part of it! Also store stdout/stderr log.

For example, in `seamless/tests/cmd/headify/test-run2.out`. Solution: to set the source file name

Should be implemented together with #123

Add __checksum__ attributes to transformer namespace objects

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`__checksum__` of the transformation to be added to the `transformer` module object. This can help in introspection/logging. It will also be forwarded by `rprod` (#190) as metadata. `__checksum__` of the...