sqlite-utils
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CSV `extras_key=` and `ignore_extras=` equivalents for CLI tool
I forgot to add equivalents of
extras_key=
andignore_extras=
to the CLI tool - will do that in a separate issue.
Originally posted by @simonw in https://github.com/simonw/sqlite-utils/issues/440#issuecomment-1155767915
I think these become part of the _import_options
list which is used in a few places:
https://github.com/simonw/sqlite-utils/blob/b8af3b96f5c72317cc8783dc296a94f6719987d9/sqlite_utils/cli.py#L765-L800
I'm going with --extras-key
and --ignore-extras
as the two new options.
This is tricky to implement because of this code: https://github.com/simonw/sqlite-utils/blob/b8af3b96f5c72317cc8783dc296a94f6719987d9/sqlite_utils/cli.py#L938-L945
It's reconstructing each document using the known headers here:
docs = (dict(zip(headers, row)) for row in reader)
So my first attempt at this - the diff here - did not have the desired result:
diff --git a/sqlite_utils/cli.py b/sqlite_utils/cli.py
index 86eddfb..00b920b 100644
--- a/sqlite_utils/cli.py
+++ b/sqlite_utils/cli.py
@@ -6,7 +6,7 @@ import hashlib
import pathlib
import sqlite_utils
from sqlite_utils.db import AlterError, BadMultiValues, DescIndex
-from sqlite_utils.utils import maximize_csv_field_size_limit
+from sqlite_utils.utils import maximize_csv_field_size_limit, _extra_key_strategy
from sqlite_utils import recipes
import textwrap
import inspect
@@ -797,6 +797,15 @@ _import_options = (
"--encoding",
help="Character encoding for input, defaults to utf-8",
),
+ click.option(
+ "--ignore-extras",
+ is_flag=True,
+ help="If a CSV line has more than the expected number of values, ignore the extras",
+ ),
+ click.option(
+ "--extras-key",
+ help="If a CSV line has more than the expected number of values put them in a list in this column",
+ ),
)
@@ -885,6 +894,8 @@ def insert_upsert_implementation(
sniff,
no_headers,
encoding,
+ ignore_extras,
+ extras_key,
batch_size,
alter,
upsert,
@@ -909,6 +920,10 @@ def insert_upsert_implementation(
raise click.ClickException("--flatten cannot be used with --csv or --tsv")
if encoding and not (csv or tsv):
raise click.ClickException("--encoding must be used with --csv or --tsv")
+ if ignore_extras and extras_key:
+ raise click.ClickException(
+ "--ignore-extras and --extras-key cannot be used together"
+ )
if pk and len(pk) == 1:
pk = pk[0]
encoding = encoding or "utf-8-sig"
@@ -935,7 +950,9 @@ def insert_upsert_implementation(
csv_reader_args["delimiter"] = delimiter
if quotechar:
csv_reader_args["quotechar"] = quotechar
- reader = csv_std.reader(decoded, **csv_reader_args)
+ reader = _extra_key_strategy(
+ csv_std.reader(decoded, **csv_reader_args), ignore_extras, extras_key
+ )
first_row = next(reader)
if no_headers:
headers = ["untitled_{}".format(i + 1) for i in range(len(first_row))]
@@ -1101,6 +1118,8 @@ def insert(
sniff,
no_headers,
encoding,
+ ignore_extras,
+ extras_key,
batch_size,
alter,
detect_types,
@@ -1176,6 +1195,8 @@ def insert(
sniff,
no_headers,
encoding,
+ ignore_extras,
+ extras_key,
batch_size,
alter=alter,
upsert=False,
@@ -1214,6 +1235,8 @@ def upsert(
sniff,
no_headers,
encoding,
+ ignore_extras,
+ extras_key,
alter,
not_null,
default,
@@ -1254,6 +1277,8 @@ def upsert(
sniff,
no_headers,
encoding,
+ ignore_extras,
+ extras_key,
batch_size,
alter=alter,
upsert=True,
@@ -1297,6 +1322,8 @@ def bulk(
sniff,
no_headers,
encoding,
+ ignore_extras,
+ extras_key,
load_extension,
):
"""
@@ -1331,6 +1358,8 @@ def bulk(
sniff=sniff,
no_headers=no_headers,
encoding=encoding,
+ ignore_extras=ignore_extras,
+ extras_key=extras_key,
batch_size=batch_size,
alter=False,
upsert=False,
Yeah my initial implementation there makes no sense:
csv_reader_args = {"dialect": dialect}
if delimiter:
csv_reader_args["delimiter"] = delimiter
if quotechar:
csv_reader_args["quotechar"] = quotechar
reader = _extra_key_strategy(
csv_std.reader(decoded, **csv_reader_args), ignore_extras, extras_key
)
first_row = next(reader)
if no_headers:
headers = ["untitled_{}".format(i + 1) for i in range(len(first_row))]
reader = itertools.chain([first_row], reader)
else:
headers = first_row
docs = (dict(zip(headers, row)) for row in reader)
Because my _extra_key_strategy()
helper function is designed to work against csv.DictReader
- not against csv.reader()
which returns a sequence of lists, not a sequence of dictionaries.
In fact, what's happening here is that dict(zip(headers, row))
is ignoring anything in the row that doesn't correspond to a header:
>>> list(zip(["a", "b"], [1, 2, 3]))
[('a', 1), ('b', 2)]
I'm going to push a branch with my not-yet-working code (which does at least include a test).