htseq
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simon-anders
HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.
Hi, I have anaconda and I am trying to use htseq. this is the code eval "$(conda shell.bash hook)" conda activate anaconda3 htseq-count format bam w_NF18553nod_sorted.bam medtr.R108_HM340.gnm1.ann1.85YW.gcv_genes.gff3 -o htseqresults.txt and...
Hello, I'm trying to count the gene abundance from Metagenomic libraries using `htseq-count program` from blast otuput format table 6 I converted it into a gff file with `blast2gff`, after...
Hi, I wonder if anyone in this community can help me figure out the reason behind the discrepancy in counts. Please see below: I am using HTSeq-count to generate counts...
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HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.