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Error: Reading phenotype file...

1

Reading phenotype file... Index(['FID', 'IID', 'fatherID', 'motherID', 'sex', 'phenotype', 'original_index'], dtype='object') Traceback (most recent call last): File "/data/ascher01/uqmmune1/miniconda3/envs/viprs_env/lib/python3.11/site-packages/pandas/core/indexes/base.py", line 3803, in get_loc return self._engine.get_loc(casted_key) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "pandas/_libs/index.pyx", line 138, in...

MuhammadMuneeb007

No valid LD matrix files were found at: data/ld/

1

When I executed python viprs/bin/viprs_fit -l data/ld/ -s /path/to/sumstats/ --output-dir / Code did not execute and said FileNotFoundError: No valid LD matrix files were found at: data/ld/ python viprs/bin/viprs_fit -l...

MuhammadMuneeb007

Hi Shadi, I hope this message finds you well. I am reaching out to address two distinct `AttributeError` issues I encountered while using VIPRS. Here are the details: 1. **First...

biostatShao