sequitur
sequitur copied to clipboard
error with lstm_ae
When i try to run the lstm_ae i get the following error:
IndexError Traceback (most recent call last)
[c:\Users\sdblo\Mijn](file:///C:/Users/sdblo/Mijn) Drive\PhD\Publicaties\graph_node_autoencoder\sequitur_example.py in line 56
[31](file:///c%3A/Users/sdblo/Mijn%20Drive/PhD/Publicaties/graph_node_autoencoder/sequitur_example.py?line=30) # torch.use_deterministic_algorithms(True)
[32](file:///c%3A/Users/sdblo/Mijn%20Drive/PhD/Publicaties/graph_node_autoencoder/sequitur_example.py?line=31)
[33](file:///c%3A/Users/sdblo/Mijn%20Drive/PhD/Publicaties/graph_node_autoencoder/sequitur_example.py?line=32) # train_data, test_data = train_test_split(data, test_size=0.1, shuffle=False, random_state=42)
(...)
[53](file:///c%3A/Users/sdblo/Mijn%20Drive/PhD/Publicaties/graph_node_autoencoder/sequitur_example.py?line=52)
[54](file:///c%3A/Users/sdblo/Mijn%20Drive/PhD/Publicaties/graph_node_autoencoder/sequitur_example.py?line=53) # train_set = torch.tensor(train_data, dtype=torch.float32)
[55](file:///c%3A/Users/sdblo/Mijn%20Drive/PhD/Publicaties/graph_node_autoencoder/sequitur_example.py?line=54) train_set = [torch.randn(10, 5, 5) for _ in range(100)]
---> [56](file:///c%3A/Users/sdblo/Mijn%20Drive/PhD/Publicaties/graph_node_autoencoder/sequitur_example.py?line=55) encoder, decoder, _, _ = quick_train(LSTM_AE, train_set, encoding_dim=64, verbose=True, epochs=500, )
File [c:\Users\sdblo\miniconda3\envs\tsl\lib\site-packages\sequitur\quick_train.py:76](file:///C:/Users/sdblo/miniconda3/envs/tsl/lib/site-packages/sequitur/quick_train.py:76), in quick_train(model, train_set, encoding_dim, verbose, lr, epochs, denoise, **kwargs)
[74](file:///c%3A/Users/sdblo/miniconda3/envs/tsl/lib/site-packages/sequitur/quick_train.py?line=73) def quick_train(model, train_set, encoding_dim, verbose=False, lr=1e-3,
[75](file:///c%3A/Users/sdblo/miniconda3/envs/tsl/lib/site-packages/sequitur/quick_train.py?line=74) epochs=50, denoise=False, **kwargs):
---> [76](file:///c%3A/Users/sdblo/miniconda3/envs/tsl/lib/site-packages/sequitur/quick_train.py?line=75) model = instantiate_model(model, train_set, encoding_dim, **kwargs)
[77](file:///c%3A/Users/sdblo/miniconda3/envs/tsl/lib/site-packages/sequitur/quick_train.py?line=76) losses = train_model(model, train_set, verbose, lr, epochs, denoise)
[78](file:///c%3A/Users/sdblo/miniconda3/envs/tsl/lib/site-packages/sequitur/quick_train.py?line=77) encodings = get_encodings(model, train_set)
File [c:\Users\sdblo\miniconda3\envs\tsl\lib\site-packages\sequitur\quick_train.py:16](file:///C:/Users/sdblo/miniconda3/envs/tsl/lib/site-packages/sequitur/quick_train.py:16), in instantiate_model(model, train_set, encoding_dim, **kwargs)
[14](file:///c%3A/Users/sdblo/miniconda3/envs/tsl/lib/site-packages/sequitur/quick_train.py?line=13) def instantiate_model(model, train_set, encoding_dim, **kwargs):
[15](file:///c%3A/Users/sdblo/miniconda3/envs/tsl/lib/site-packages/sequitur/quick_train.py?line=14) if model.__name__ in ("LINEAR_AE", "LSTM_AE"):
---> [16](file:///c%3A/Users/sdblo/miniconda3/envs/tsl/lib/site-packages/sequitur/quick_train.py?line=15) return model(train_set[-1].shape[-1], encoding_dim, **kwargs)
[17](file:///c%3A/Users/sdblo/miniconda3/envs/tsl/lib/site-packages/sequitur/quick_train.py?line=16) elif model.__name__ == "CONV_LSTM_AE":
[18](file:///c%3A/Users/sdblo/miniconda3/envs/tsl/lib/site-packages/sequitur/quick_train.py?line=17) if len(train_set[-1].shape) == 3: # 2D elements
File [c:\Users\sdblo\miniconda3\envs\tsl\lib\site-packages\sequitur\models\lstm_ae.py:87](file:///C:/Users/sdblo/miniconda3/envs/tsl/lib/site-packages/sequitur/models/lstm_ae.py:87), in LSTM_AE.__init__(self, input_dim, encoding_dim, h_dims, h_activ, out_activ)
[83](file:///c%3A/Users/sdblo/miniconda3/envs/tsl/lib/site-packages/sequitur/models/lstm_ae.py?line=82) super(LSTM_AE, self).__init__()
[85](file:///c%3A/Users/sdblo/miniconda3/envs/tsl/lib/site-packages/sequitur/models/lstm_ae.py?line=84) self.encoder = Encoder(input_dim, encoding_dim, h_dims, h_activ,
[86](file:///c%3A/Users/sdblo/miniconda3/envs/tsl/lib/site-packages/sequitur/models/lstm_ae.py?line=85) out_activ)
---> [87](file:///c%3A/Users/sdblo/miniconda3/envs/tsl/lib/site-packages/sequitur/models/lstm_ae.py?line=86) self.decoder = Decoder(encoding_dim, input_dim, h_dims[::-1],
[88](file:///c%3A/Users/sdblo/miniconda3/envs/tsl/lib/site-packages/sequitur/models/lstm_ae.py?line=87) h_activ)
File [c:\Users\sdblo\miniconda3\envs\tsl\lib\site-packages\sequitur\models\lstm_ae.py:46](file:///C:/Users/sdblo/miniconda3/envs/tsl/lib/site-packages/sequitur/models/lstm_ae.py:46), in Decoder.__init__(self, input_dim, out_dim, h_dims, h_activ)
[43](file:///c%3A/Users/sdblo/miniconda3/envs/tsl/lib/site-packages/sequitur/models/lstm_ae.py?line=42) def __init__(self, input_dim, out_dim, h_dims, h_activ):
[44](file:///c%3A/Users/sdblo/miniconda3/envs/tsl/lib/site-packages/sequitur/models/lstm_ae.py?line=43) super(Decoder, self).__init__()
---> [46](file:///c%3A/Users/sdblo/miniconda3/envs/tsl/lib/site-packages/sequitur/models/lstm_ae.py?line=45) layer_dims = [input_dim] + h_dims + [h_dims[-1]]
[47](file:///c%3A/Users/sdblo/miniconda3/envs/tsl/lib/site-packages/sequitur/models/lstm_ae.py?line=46) self.num_layers = len(layer_dims) - 1
[48](file:///c%3A/Users/sdblo/miniconda3/envs/tsl/lib/site-packages/sequitur/models/lstm_ae.py?line=47) self.layers = nn.ModuleList()
IndexError: list index out of range
same error here.