enzynet
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Saving the flatten layer output.
Thank you for open sourcing your work. I am working on an implementation of Enzynet on protein PDB files. What I am looking for is the feature vector of each protein generated in flatten layer.
I made a Keras function to extract the feature vector form the flatten layer. I don't know what to pass as input in the function. I need to use the feature vector for further analysis. Thank you for your time and consideration. I will wait for your response.
hi, I also try to run this project but meet environment problem. R equirement isn't record the version, and I have no idea on how to find the environment information three years ago. thanks!
@Rajratnpranesh: Hi Raj, thanks for the feature request. Apologies for the delay. This is definitely something we can look into. I'm doing some cleanup at the moment -- I will look into implementing a wrapper or sample notebook that does that at some point. Relevant updates will be posted on this issue for tracking purposes.
Hi @w-t-2017, thanks for the feedback. You're right, we should have indicated package versions compatible with the script at the time we pushed this online. I'm currently in the process of fixing version mismatches. Once this is done, I'll make sure to indicate working numbers in the requirement.txt
to avoid the same issue in the future. I just opened the dedicated issue https://github.com/shervinea/enzynet/issues/7 to track this feature request.
Thanks all for your interest in this work!