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Analyses - allow attachment of tree as analysis

Open GoogleCodeExporter opened this issue 9 years ago • 9 comments

It would be useful to be able to take a tree generated separately from the 
basedata and attach it as a cluster or similar output.  

This would enable users to run analyses outside of Biodiverse and still be able 
to use the visualisation tools that Biodiverse enables.  Users could also then 
run calculations for the cluster nodes as per usual.  

Equally, one could run a cluster analysis using one basedata and then transfer 
it to a second basedata.  This is useful when one wishes to cluster using 
species data but then analyse numeric labels.  

The system will need to gracefully handle these when running the 
randomisations, as they cannot be replicated.  See also issue #284 in regard to 
calculations per node under the randomisations. 

The system will also need to support label remapping in the attachment, and 
then filter out those named nodes that do not match the basedata (or simply 
flag them as not relevant in some way).


Original issue reported on code.google.com by shawnlaffan on 11 Dec 2012 at 9:57

GoogleCodeExporter avatar Mar 27 '15 22:03 GoogleCodeExporter

Fix typo in Summary

Original comment by shawnlaffan on 24 Feb 2013 at 9:14

  • Changed title: Analyses - allow attachment of tree as analyses
  • Added labels: ****
  • Removed labels: ****

GoogleCodeExporter avatar Mar 27 '15 22:03 GoogleCodeExporter

And fix a grammatical error in the summary

Original comment by shawnlaffan on 2 Mar 2013 at 12:13

  • Changed title: Analyses - allow attachment of tree as analysis
  • Added labels: ****
  • Removed labels: ****

GoogleCodeExporter avatar Mar 27 '15 22:03 GoogleCodeExporter

Add 1.0 milestone

Original comment by shawnlaffan on 14 Nov 2013 at 4:26

  • Added labels: ****
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GoogleCodeExporter avatar Mar 27 '15 22:03 GoogleCodeExporter

Actually add it.

Original comment by shawnlaffan on 14 Nov 2013 at 4:26

  • Added labels: Milestone-Release1.0
  • Removed labels: ****

GoogleCodeExporter avatar Mar 27 '15 22:03 GoogleCodeExporter

This issue was updated by revision r2919.

Add branch to work on this issue

Original comment by shawnlaffan on 17 Oct 2014 at 7:25

  • Added labels: ****
  • Removed labels: ****

GoogleCodeExporter avatar Mar 27 '15 22:03 GoogleCodeExporter

This issue was updated by revision r2984.

Merge recent trunk revisions across to the branch

Original comment by shawnlaffan on 27 Oct 2014 at 3:54

  • Added labels: ****
  • Removed labels: ****

GoogleCodeExporter avatar Mar 27 '15 22:03 GoogleCodeExporter

Push back to a later release. 

Original comment by shawnlaffan on 13 Nov 2014 at 3:08

  • Added labels: ****
  • Removed labels: Milestone-Release1.0

GoogleCodeExporter avatar Mar 27 '15 22:03 GoogleCodeExporter

This issue was updated by revision r3032.

Delete branch for now as it has likely become stale.  
A new one can be created when needed.

Original comment by shawnlaffan on 16 Nov 2014 at 4:37

  • Added labels: ****
  • Removed labels: ****

GoogleCodeExporter avatar Mar 27 '15 22:03 GoogleCodeExporter

Add cross-ref: #284

shawnlaffan avatar Oct 27 '19 05:10 shawnlaffan