Diagnostics.py: "Intruder states: Missing steps in output.log" when extending a trajectory

[MartinPeschel]

Hello everyone!

I ran a trajectory to tmax successfully, then increased tmax and added restart to the input to get more simulation time. When analyzing the result with diagnostics.py the restarted trajectory is shows the message Intruder states: Missing steps in output.log and T_use does not increase, even though the trajectory ran successfully. I found a work-around by manually editing output.log and removing the first sharc footer lines and the second sharc header lines. Is there a better way?