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Published
20 hours ago •
shap
shap
[Meta-issue] Increase test coverage
Problem Description
We currently only have a pretty low coverage which makes it hard to refactor certain parts of the code base. We would like to increase the coverage to make it safe for everyone to create PRs and increase the level of safety reviewers feel when accepting PRs.
Our latest code coverage can be seen on CodeCov.io.
| File | statements | missing | excluded | coverage |
|---|---|---|---|---|
| shap/explainers/pytree.py | 186 | 186 | 0 | 0% |
| shap/utils/_keras.py | 41 | 41 | 0 | 0% |
| shap/utils/image.py | 81 | 81 | 0 | 0% |
| shap/plots/_waterfall.py | 316 | 306 | 0 | 3% |
| shap/plots/_benchmark.py | 125 | 119 | 0 | 5% |
| shap/plots/_partial_dependence.py | 151 | 143 | 0 | 5% |
| shap/plots/_decision.py | 243 | 228 | 0 | 6% |
| shap/plots/_violin.py | 197 | 186 | 0 | 6% |
| shap/plots/_force_matplotlib.py | 210 | 195 | 0 | 7% |
| shap/explainers/_kernel.py | 426 | 390 | 0 | 8% |
| shap/plots/_group_difference.py | 46 | 42 | 0 | 9% |
| shap/maskers/_composite.py | 99 | 89 | 0 | 10% |
| shap/explainers/_sampling.py | 115 | 102 | 0 | 11% |
| shap/plots/_heatmap.py | 70 | 62 | 0 | 11% |
| shap/explainers/_linear.py | 209 | 182 | 3 | 13% |
| shap/explainers/other/_maple.py | 166 | 145 | 0 | 13% |
| shap/plots/_utils.py | 150 | 130 | 0 | 13% |
| shap/maskers/_image.py | 139 | 119 | 0 | 14% |
| shap/plots/_image.py | 115 | 99 | 0 | 14% |
| shap/actions/_optimizer.py | 55 | 47 | 0 | 15% |
| shap/plots/_monitoring.py | 44 | 36 | 0 | 18% |
| shap/plots/_embedding.py | 31 | 25 | 0 | 19% |
| shap/explainers/_permutation.py | 91 | 73 | 0 | 20% |
| shap/plots/_scatter.py | 445 | 350 | 0 | 21% |
| shap/explainers/other/_lime.py | 45 | 35 | 0 | 22% |
| shap/plots/_beeswarm.py | 521 | 401 | 0 | 23% |
| shap/explainers/other/_treegain.py | 21 | 16 | 0 | 24% |
| shap/models/_teacher_forcing.py | 178 | 134 | 0 | 25% |
| shap/models/_text_generation.py | 100 | 75 | 0 | 25% |
| shap/explainers/_additive.py | 38 | 27 | 0 | 29% |
| shap/explainers/other/_random.py | 28 | 20 | 0 | 29% |
| shap/models/_topk_lm.py | 110 | 76 | 0 | 31% |
| shap/utils/_clustering.py | 120 | 83 | 0 | 31% |
| shap/datasets.py | 154 | 105 | 0 | 32% |
| shap/utils/_legacy.py | 172 | 103 | 0 | 40% |
| shap/plots/_text.py | 619 | 355 | 0 | 43% |
| shap/plots/colors/_colorconv.py | 230 | 130 | 0 | 43% |
| shap/maskers/_output_composite.py | 32 | 18 | 0 | 44% |
| shap/maskers/_fixed_composite.py | 31 | 17 | 0 | 45% |
| shap/explainers/_partition.py | 247 | 132 | 0 | 47% |
| shap/explainers/_tree.py | 1120 | 543 | 4 | 52% |
| shap/_explanation.py | 501 | 231 | 0 | 54% |
| shap/maskers/_masker.py | 13 | 6 | 0 | 54% |
| shap/plots/_bar.py | 221 | 98 | 0 | 56% |
| shap/utils/_general.py | 194 | 86 | 0 | 56% |
| shap/utils/_masked_model.py | 267 | 115 | 0 | 57% |
| shap/plots/_force.py | 240 | 101 | 0 | 58% |
| shap/explainers/_gradient.py | 334 | 137 | 0 | 59% |
| shap/utils/transformers.py | 37 | 15 | 0 | 59% |
| shap/actions/_action.py | 5 | 2 | 0 | 60% |
| shap/maskers/_fixed.py | 10 | 4 | 0 | 60% |
| shap/explainers/other/_coefficient.py | 8 | 3 | 0 | 62% |
| shap/maskers/_tabular.py | 130 | 49 | 0 | 62% |
| shap/init.py | 71 | 25 | 0 | 65% |
| shap/maskers/_text.py | 285 | 97 | 0 | 66% |
| shap/explainers/_deep/deep_tf.py | 486 | 145 | 0 | 70% |
| shap/explainers/_exact.py | 181 | 51 | 0 | 72% |
| shap/explainers/_explainer.py | 240 | 62 | 0 | 74% |
| shap/links.py | 16 | 4 | 0 | 75% |
| shap/explainers/tf_utils.py | 40 | 9 | 0 | 78% |
| shap/_version.py | 11 | 2 | 0 | 82% |
| shap/utils/_show_progress.py | 29 | 4 | 0 | 86% |
| shap/_serializable.py | 127 | 16 | 0 | 87% |
| shap/plots/init.py | 20 | 2 | 0 | 90% |
| shap/explainers/_deep/deep_pytorch.py | 256 | 23 | 0 | 91% |
| shap/explainers/_gpu_tree.py | 30 | 2 | 0 | 93% |
| shap/explainers/other/_ubjson.py | 121 | 7 | 0 | 94% |
| shap/models/_transformers_pipeline.py | 22 | 1 | 0 | 95% |
| shap/models/_model.py | 27 | 1 | 0 | 96% |
| shap/plots/colors/_colors.py | 88 | 2 | 0 | 98% |
| shap/actions/init.py | 2 | 0 | 0 | 100% |
| shap/explainers/init.py | 23 | 0 | 0 | 100% |
| shap/explainers/_deep/init.py | 32 | 0 | 0 | 100% |
| shap/explainers/_deep/deep_utils.py | 12 | 0 | 0 | 100% |
| shap/explainers/other/init.py | 6 | 0 | 0 | 100% |
| shap/maskers/init.py | 9 | 0 | 0 | 100% |
| shap/models/init.py | 6 | 0 | 0 | 100% |
| shap/plots/_labels.py | 1 | 0 | 0 | 100% |
| shap/plots/colors/init.py | 2 | 0 | 0 | 100% |
| shap/utils/init.py | 5 | 0 | 0 | 100% |
| shap/utils/_exceptions.py | 18 | 0 | 0 | 100% |
I suggest that we gradually start making PRs that increase the coverage especially of the less well covered files.
