Joe Zhu

hi @gmbecker , not for roverflow. as these are internal links

So here is what I propose to add a join tree/table function, i.e. consider a labeld newick form of the tree structures. T1: ((aaa)int1, (ccc)int2)root; T2: ((a, b)int1, (c, d)int2)root;...

hi @Teninq , can you check this please if you could use Gabe's suggestion and make the implemation in your table. Thanks! https://github.com/insightsengineering/rtables/issues/663#issuecomment-1597529482

that is right, @ayogasekaram , can you create an issue for "df_explicit_na" in tern please. Thanks!

adding documentation for 1. plaf 2. reference strain

Assertion failed: (indexOfChromStarts_.size() == this->chrom_.size()), function trimming, file src/dEploidIO.cpp, line 992.

this was due to vsqlod set up, default value takes 8. when data is poor, and all been filtered, this needs to be more flexible.

Hi @bredelings , had a quick look at the data. You have got a lot of missing data. Would it be ok to encode your "." to zeros? does it...

@bredelings I am with you. Should be clonal I think. Do you have a reference panel for this? What your initial k is set to?

https://deploid.readthedocs.io/en/latest/FAQ.html#over-fitting Hey @bredelings We have seen this problem before as well. You can force and set k to 1. And just use the plaf as the reference to learn the...