docker image

Open elswob opened this issue 4 years ago • 4 comments

Be great if there was a docker image with VCF, BGEN, PLINK support.

Nov 19 '21 10:11 elswob

Thanks for the suggestion @elswob!

This looks like it might be a useful guide to building such an image: https://uwekorn.com/2021/03/01/deploying-conda-environments-in-docker-how-to-do-it-right.html

Nov 23 '21 12:11 tomwhite

Thanks @tomwhite . Ok, I've had a go at this - https://hub.docker.com/repository/docker/elswob/sgkit

Happy to modify or move to a better location.

Nov 23 '21 13:11 elswob

Do we prefer Docker Hub, GitHub Packages, or both? https://docs.github.com/en/actions/publishing-packages/publishing-docker-images

Nov 23 '21 13:11 hammer

I guess Docker hub is the "standard" place for Docker images? I have no real opinion though, I only use Docker images when building JupyterHubs.

Nov 23 '21 13:11 jeromekelleher