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Variant positions less than one?

Open hyanwong opened this issue 6 months ago • 1 comments

I'm assuming that variant positions must be 1 or greater in an sgkit dataset. Is this part of the spec, or enforced anywhere? I looked through the docs and couldn't find anything. I assume setting position to -1 will also break stuff?

In tskit the positions start at 0, so there's a bit of trickery needed in my use-case, I suspect.

hyanwong avatar Jan 22 '24 16:01 hyanwong