nf-tower icon indicating copy to clipboard operation
nf-tower copied to clipboard

Published 20 hours ago • verified publisher icon seqeralabs

Missing containers when using DSL2

Open edgano opened this issue 4 years ago • 5 comments

I'm not sure if there is a way to show the list of containers when running DSL2 and tower. Could be great to have an overview of all of them and easy to check if there is an issue.

edgano avatar May 29 '20 08:05 edgano

👉 #215 (?)

pditommaso avatar May 29 '20 09:05 pditommaso

I saw it, but it's an issue of DSL2. It's not working in local or the CRG. #215 I guess its due the executors, and this is due the modules ? I dont know.

edgano avatar May 29 '20 10:05 edgano

Not sure to understand, how many containers the pipeline use? where are you execting? what you are getting?

pditommaso avatar May 29 '20 15:05 pditommaso

Running locally or at CRG's cluster. And using nextflow modules. I have this. I guess it's because I'm using multiple containers, and I would like to know if its possible to "list" the containers used in the pipeline. like:

processFoo : containerX
processBar : containerY

Screenshot 2020-06-02 at 15 34 35

Thanks in advance.

edgano avatar Jun 02 '20 13:06 edgano

Got it. Yes, it should be added the support for multiple containers.

pditommaso avatar Jun 05 '20 08:06 pditommaso