species annotation part 4

[h-2]

• [ ] directly extract taxID from header if available, user specified regex?
• [ ] double-check regex to make sure that single id is not matched twice
• [ ] make staxids in sam/bam be array of int, instead of , separated string [depends on seqan :expressionless: ]

[h-2]

This will stay in the backlog for now

[h-2]

directly extract taxID from header if available, user specified regex?

not planned

double-check regex to make sure that single id is not matched twice

This doesn't happen anymore with new parsing code.

make staxids in sam/bam be array of int, instead of , separated string [depends on seqan expressionless ]

not possible with SeqAn2 output.