SEHI L'YI
SEHI L'YI
This can be done by setting the opacity of the current SVG-based brush elements `0` and drawing the identical Arc graphics using Pixi.js, i.e., the current SVG elements are for...
💯 agreed. Some additional thoughts: 1. Another related example is that we use [higlass.schema.ts](https://github.com/gosling-lang/gosling.js/blob/c00f4f8ae2fee485df7d153e56fb970815f649cd/src/core/higlass.schema.ts) which was semi-automatically generated at some point based on `higlass.schema.json` of the HiGlass core repo. We...
I see the need for supporting data reference, but I am also a bit concerned about using IDs since keeping track of multiple IDs in the grammar can make writing/maintaining...
> I think there is an argument to be made that root "datasets" allow for better re-use of Gosling specifications and easier maintenance. Users can replace a data definition in...
Thanks a lot for reporting these! These are really helpful. - Reducing the number of edge crossings is definitely desirable and would require the refinement of the displacement algorithm. The...
Hi Zhen! > 1. y-axis needs to be fixed during the zooming and panning. If you know the min and max values of the y-axis, you can fix the y-axis...
@zhangzhen Yes, user interactions are something that we will definitely support in the future and are limited at the moment. And, knowing use cases like yours will be really helpful....
Moved the question right above as a new GitHub issue (#546) since it became quite different from the original question.
The splice junctions can be inferred by using both a **BAM file** and a **BED/GFF file**. However, Gosling does not allow combining multiple datasets in a single track. Given that...
**To-Do** - [ ] Ignore skipped ranges (`N`) when calculating coverages - [ ] Coverage calculation directly from the BAM worker - [ ] A way to flip some of...