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Template from SampleType need to contain attributes' constrains (actually, it is not a new issue, but can't find old ne any more)

Open OlgaKrebs opened this issue 2 years ago • 7 comments

Creating SampleType one can define attribute, its type (string, float, date,etc) or constrain values (controlled vocabularies, ontology term,etc). But corresponding downloaded template does only contail attribute names, so user has to look up in SEEK which values are allowed and typos are not prevented

OlgaKrebs avatar Jul 08 '22 15:07 OlgaKrebs

Having the CV as dropdown in Excel used to work, so I guess this is a bug (something broke). I would say that this is a rather urgent issue.

floradanna avatar Jul 14 '22 06:07 floradanna

yes, I also remember to have seen this... but not sure it was on FAIRDOMHub (or any other testing instance

OlgaKrebs avatar Jul 14 '22 07:07 OlgaKrebs

@OlgaKrebs I have just tried to download a sample type (from FAIRDOMHub) and I actually see the CV in excel.

Is it still not working for you? Could you please try again and let me know?

Screenshot 2022-07-14 at 10 03 09

floradanna avatar Jul 14 '22 08:07 floradanna

no, it doesn't

sampleType 173 has 3 columns as CVs:

Tissue | Controlled Vocabulary - BRENDA tissue | Tissue type | - | - ethnicity | Controlled Vocabulary - Ethnicity | Not specified | - | - gender | Controlled Vocabulary - Liver cell types22

Tissue Controlled Vocabulary - [BRENDA tissue](https://fairdomhub.org/sample_controlled_vocabs/19) Tissue type - - ethnicity Controlled Vocabulary - [Ethnicity](https://fairdomhub.org/sample_controlled_vocabs/8) Not specified - - gender Controlled Vocabulary - [Liver cell types22](https://fairdomhub.org/sample_controlled_vocabs/20)

but exported excel looks like this image

OlgaKrebs avatar Jul 14 '22 11:07 OlgaKrebs

no drop downs

OlgaKrebs avatar Jul 14 '22 11:07 OlgaKrebs

@floradanna which one did you use?

OlgaKrebs avatar Jul 14 '22 12:07 OlgaKrebs

thanks to Flora - I have to double click on the CVs field in Excel and drop down list appears . May be we need to add a line for users, otherwise they can even start typing in this field and gets error than ...

OlgaKrebs avatar Jul 14 '22 12:07 OlgaKrebs