Sebastien Boisvert

Generating data in /home/boisver1/corbeil_group-lustre03/projects/ray-assembler/tickets/132/ray-ticket-132-2013-06-11-1 for inspection in Ray Cloud Browser.

data is in data, will deploy endpoint tomorrow.

Hello, I am able to create a bank with AMOS from a Ray AMOS file. The implementation is based on the specification: http://sourceforge.net/apps/mediawiki/amos/index.php?title=Message_Types Maybe the protocol uses optional information in...

Reported-by: Lionel Frangeul [email protected]

@mscook > "Ray natively produce the afg file, however it is not complete. In particular it lacks all the "first" part > in which reads are described. Without this information...

Basically, if a gene is in one contig, but in 10 copies in the genome, output it 10 times. Not sure if this will work with RNA-Seq or metagenomes.

"sounds tricky" -- F.L.

Hi @deepthoughts I indeed moved on to a new project for my postdoctorate. It is called BioSAL (Biological Sequence Analysis Library). https://github.com/sebhtml/biosal I posted a short message to the Ray...

Is this from a Coverity report ?

Maybe this one is related too: http://permalink.gmane.org/gmane.science.biology.ray-genome-assembler/739