Sebastien Boisvert

[boisver1@ip03-mp2 ANL]$ qsub NormalStool-14.sh 26991.mp2.m

-14 hanged at the start, maybe because of hardware, who knows.

-15 failed because 3 checkpoint files are corrupted on mp2. [boisver1@ip03-mp2 ANL]$ qsub NormalStool-16.sh 27065.mp2.m

with raw code (-13): Rank 1 has 3583 seeds to register. with new patch: xxx

needs #149 this will be in the header

Let's say we have a peak coverage of 800 (unique region). Then, during the traversal, it goes down to 300 (unique region), and suddenly, spikes at 600 (repeated region). This...

This ticket may fixes #153 -- it's probably worth a try.

Evaluation: 15 human-hours

/mnt/lustre03/corbeil/corbeil_group/projects/ray-assembler/tickets/132/contig-13000021

 Computing the coverage on seeds is probably good enough.