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Question of prepare input files

Open Ping-lin14 opened this issue 3 years ago • 1 comments

Hi, My scDNA data comes from the Mission bio platform, and "barcodes.tsv" or any file in the same format will not be output in Tapestri Pipeline. Is there any way to help me generate "barcodes.tsv"?

Ping-lin14 avatar Jul 30 '21 03:07 Ping-lin14

Hello,

I checked the mission bio website and saw this page: https://support.missionbio.com/hc/en-us/articles/360045939853-Pipeline-output-files-overview Not sure if you got output files the same as those listed here. There is a file "barcode.cell.coverage.tsv". It seems to include cell barcodes of each cell based on the description. If this is the case, you could generate a tsv/ txt file with one column, each line indicating different cell barcodes.

seasoncloud avatar Jul 30 '21 17:07 seasoncloud