Sam Abbott

Results 179 issues of Sam Abbott

Rmd check on main is currently failing on scheduled checks. This is likely due to a upstream change in one of our dependency changes See here: https://github.com/epinowcast/epinowcast/actions/workflows/R-CMD-check.yaml?query=branch:main We should fix...

bug
high-priority

As the title and see https://github.com/ropensci-review-tools/autotest for more details. I think this is a useful way to test more edge cases and catch issues?

enhancement
help wanted
good first issue

From @kgostic: > It would be really helpful if the [model definition writeup](https://package.epinowcast.org/articles/model.html) or the module help documentation contained more information about how the reference / report / expectation modules...

documentation
enhancement

From @kgostic: > Some notes/a vignette/even a short paragraph with a reference would be really helpful for people trying to wrap their heads around how the lm ~ syntax maps...

documentation
enhancement
help wanted

From @kgostic: > We could really use a data dictionary that maps parameter names to variables/biological concepts in the [model definition](https://package.epinowcast.org/articles/model.html) writeup. I recognize that this may not be straightforward...

documentation
enhancement
help wanted

Move to a generic solve function and make the simulate function the major passed function that controls behaviour.

triage

## Background Vignette walking through the use of PMCMC modelling using a base R model but any other tools required. ## Aim Explain the basics of PMCMC and give directions...

enhancement

[`{modelbuilder}`](https://github.com/ahgroup/modelbuilder) and [`{DSAIDE}`](https://ahgroup.github.io/DSAIDE/) are both packages that try to teach users how to use dynamic models and understand their dynamics. They should be added to the following: * Resources vignette...

enhancement

Use {slyer} in makefile commit pipeline for automatic package styling.

enhancement