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Batch correction with MOFA

Open alitinet opened this issue 2 years ago • 0 comments

Hi,

I wanted to double check that I'm running MOFA correctly. I have two batches in my data and the function I'm using is

mu.tl.mofa(mdata, groups_label='batch', gpu_mode=True)

The resulting UMAP looks like this. Is this the correct way to run MOFA on batches? Thanks! umap_mofa

alitinet avatar Oct 12 '22 15:10 alitinet