mountainsort_examples

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Hello, I have very little experience with Python and am having trouble figuring out how to change clip size when sorting. So far I have been using a jupyter notebook...

BottjerLab

Install issue

3

Have run into a problem when verifying my installation of the mountainsort package. I'm using a Windows 10 system running WSL2 to create a Linux (Ubuntu 20.0+) environment. I've tried...

YesterdaySam

I was able to `pip install ml_ms4alg` and `pip3 install ml_ephys`, but when I ran `pip3 install ml_pyms`, I received the error: ``` Could not install packages due to an...

ckemere

Hi, I used old MountainSort for some time and I planed to switch to the "new" one. I used spikeIterface to launch it. Howerver when I analysed datas obtained it...

llobetv

Hi, I try to use mountainSort with spikeInterface and I have an issue, there is no way to change tmp/ directory location and mine is too small. I manage to...

llobetv

Cannot install spikeforestwidgets

4

I am trying to install everything per the README so I can work with the Jupyter examples. When I get to the step where I am supposed to install spikeforestwidgets,...

holmescharles

I'm trying to work with this project again, and am immediately hitting a block. I just installed everything via conda and cloned the "mountainsort_examples" repo to my computer. I am...

holmescharles

Error running process ephys.bandpass_filter: Process returned with non-zero error code (255)

2

I created the .mda file, geom.csv and params.json. My data has only 1 channel. The contents of my geom.csv file: 0,0 The contents of my params.json file: {"samplerate": 10000} While...

manashpratim

Using curation with ms4alg.sort

4

Based on the MS3 docs it seems the `curate` flag needs to be set to true to run automatic curation. Is there documentation on how to do this with `ms4alg.sort`?

Bassir

Hello, I'm running into an index error when running MountainSort. This seems to only happen with a few specific data sets and not others, and I'm not clear on where...

hazab