hdbscan icon indicating copy to clipboard operation
hdbscan copied to clipboard

Published 20 hours ago • verified publisher icon scikit-learn-contrib

Installation issue

Open bits-qubits opened this issue 3 years ago • 3 comments

I am getting this installation error

hdbscan/_hdbscan_tree.c:4:10: fatal error: Python.h: No such file or directory #include "Python.h" ^~~~~~~~~~ compilation terminated. error: command '/usr/bin/gcc' failed with exit code 1

ERROR: Failed building wheel for hdbscan

bits-qubits avatar Jan 04 '22 03:01 bits-qubits

It looks like you are missing the header files for your Python installation. How to install them can vary depending on the version of Python you are using, and on which operating system. For example, on my Debian Linux installation, I'd have to run sudo apt install python3-dev

sk1p avatar Jan 10 '22 18:01 sk1p

Seems like people are also facing this issue: https://github.com/scikit-learn-contrib/hdbscan/issues/428

I fixed the same issue by running sudo apt install python*your version of python*-dev. For me, it was sudo apt install python3.9-dev

phillip9077 avatar Jan 27 '22 21:01 phillip9077

Doesn't work for me (Ubuntu from WSL):

ERROR: Could not build wheels for hdbscan, which is required to install pyproject.toml-based projects

You also need to install build-essential:

apt-get install build-essential

hp0404 avatar Jun 01 '22 17:06 hp0404