Philipp Schlegel

FYI: - fef8515ce31e968735e1ec6f8d9e48bcb0b44c87 makes it so that `cut_neuron` always returns a single neuronlist containing 1 to many neurons (sorted distal -> proximal) - with d582212af60d733dcd259f717b0f0506ab16cd78 all functions should return a...

Cool! Do you know if this will be back ported?

Yeah, I've heard about the pydantic/fastapi thing. Let's see how this pans out.

Another breadcrumb to chase up: while individual KNN queries with `pykdtree` are faster, it looks like there is some blocking when used with multiprocessing that makes it slower than `scipy`.

Good point! Confusingly, I managed to get `pykdtree` to behave similar to on my Mac in both concurrent and non-concurrent contexts by setting `OMP_NUM_THREADS=1`. On a related note: I've been...

@jefferis had a very good explanation for this behaviour: Apple's clang compiler doesn't support openmp which is why that flag might not need to be set on OSX.

Happy to pick this up if you don't have the bandwidth at the moment, @clbarnes. At first glance, the only problem appears to be that `LookupNdBuilder` uses the length of...

@swilson27 I pushed some changed to the [`generic_lookupnd`](https://github.com/navis-org/navis/tree/generic_lookupnd) branch. I haven't tried this with syNBLAST yet but perhaps you want to take it for a spin?

I'd be game for that. Would you want to outsource only the transforms or also the bridging system? Re replacing `.xform()`: I actually went a bit off script there in...

I went ahead and created a skeleton repo at https://github.com/schlegelp/xform So far, I've only moved a bunch of code over from navis. I also reserved `xform` on PyPI but I'm...