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Published 20 hours ago • verified publisher icon satijalab

Visium Voxels Don't Load Properly on Combined Seurat Object using Seurat v5.1.0

Open TeodoraTockovska opened this issue 8 months ago • 8 comments

Hi Seurat team!

I have found a bug while using SpatialPlot() on a combined Seurat object containing 12 Visium samples. While using CRAN's version of Seurat (v5.1.0), SpatialPlot does not display the voxels over the H&E images on 10/12 samples. I reverted back to Seurat v5 and SpatialPlot works as intended.

Thanks.

TeodoraTockovska avatar May 31 '24 20:05 TeodoraTockovska