SCTransform Node Stack Overflow Error - one cause (Rfast package)

[andrei-stoica26]

Hi Christoph,

Loading the Rfast package triggers a Node Stack Overflow Error in SCTransform. The error message is the same as the one seen e.g. here (https://github.com/satijalab/seurat/issues/3904) and here (https://github.com/ChristophH/sctransform/issues/87).

Rfast triggers the same error in another Seurat function, FindNeighbors, if nn.method is not set to "rann" (https://github.com/satijalab/seurat/issues/4263). I hope this information will be useful.

Best, Andrei

[ChristophH]

Hi Andrei,

Yes, you are right, thank you for bringing it up.

I had I run into this problem (again) recently. The problem is also described here https://github.com/RfastOfficial/Rfast/issues/5

I will add it to the known issues section.