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RunAzimuth offline with homolog.table path reference

Open KalinNonchev opened this issue 3 months ago • 3 comments

Hi,

I would like to use RunAzimuth offline/ without internet connection. For this, I have downloaded already the ref.Rds and idx.annoy files I need. However, here https://github.com/satijalab/azimuth/blob/243ee5db80fcbffa3452c944254a325a3da2ef9e/R/azimuth.R#L103 the homologs link is hardcoded and I don't see an option to specify a local copy of the homolog.table file from RunAzimuth. Could you help me with this?

Thank you in advance!

Best,

KalinNonchev avatar Apr 03 '24 16:04 KalinNonchev