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Markers listed in Azimuth for human tonsil are incorrect and in conflict with original preprint?
Hi there,
Thanks for the tool.
The markers listed for the celltype.l2
at https://azimuth.hubmapconsortium.org/references/#Human%20-%20Tonsil for the human tonsil reference dataset are not correct and are entirely different from what detailed in the preprint or through the author's HCATonsilData
tool developed by @massonix
EX: For CM CD8 T cells:
- From HCATonsilData tool: IL7R,ANXA1,S100A4,CCR7,CD28
- From Azimuth app/website: CD2, CD8A, CD8B, GPR171, IL7R, ITGA1, GZMK, GZMA, SAMD3, GIMAP7
Would you mind clarifying whether the list is just not updated but the annotation is still using the correct markers?
Thank you.