Results differ between App and local run

[seb951]

Hi,

Thanks for the great tool. I have run different scRNA datasets (human-lung-v2) using the App and then re-running it locally using the Analysis script template supplied in the Download section of the App.

I noticed that with the same dataset (reference data obtained through SeuratData), and with the same QC filter settings, I obtain different results (i.e. mapping.scores or predicted.ann_level_N.scores run through the App and locally and still highly correlated, but definitely different).

Anyone has tested/experienced this ? Any reason why results would be different and which one to trust?

I am using Seurat v4.3.0 & Azimuth v0.4.6.

Thanks a lot.