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JN.1.22/XDD.1 recombinant(27 seqs, 2 countries, 21% Galicia, 2 with S:F456L)

Open xz-keg opened this issue 1 year ago • 8 comments

There seems to be a new recombinant which is best explained by XDD.1/JN.1.22 recomb.

XDD.1+A5720G(rev),A6183G,T6541C(rev),C13019T,G12111A,C19164T

Orf1a: S1819G(rev), S3949N

XDD.1--JN.1.22--XDD.1

Breakpoint 1 between 3566 and 5719 Breakpoint 2 between 13020 and 23972

G12111A,C19164T are private

GISAID query: C13019T, A6183G, C29625T No. of seqs: 3(Spain) EPI_ISL_18927194, 2024-2-13 EPI_ISL_18927200,18927201, 2024-2-15

usher

image

xz-keg avatar Feb 24 '24 17:02 xz-keg