Stefan Appelhoff

"phenotype.tsv" referenced in part of validator, but this is not a BIDS file

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https://github.com/bids-standard/bids-validator/blob/2d923f501bcf97b14e612833fb1bcb3af39f2b67/bids-validator/bids_validator/tsv/non_custom_columns.json#L68 In BIDS we have `phenotype/.tsv` but not `phenotype.tsv`. See: https://bids-specification.readthedocs.io/en/stable/modality-agnostic-files.html#phenotypic-and-assessment-data brought up by @VisLab in #1876

MAINT: update release protocol --> versioning scheme

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For future releases, we should follow https://semver.org/ more closely and always add the patch version as well. That is, `0.14` would be `0.14.0`. See discussion here: - https://github.com/mne-tools/mne-installers/pull/227#discussion_r1399679112

prepare for pytest>=8

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- xref: https://github.com/mne-tools/mne-python/pull/12376

Using: > Copyright the MNE-BIDS contributors. following: - https://github.com/mne-tools/mne-python/pull/12221

Let pybv write [coordinates] section to vhdr files

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See BrainVision data file [specification](https://www.brainproducts.com/productdetails.php?id=21&tab=5). The OPTIONAL `[Coordinates]` section in a `vhdr` file comes right after the REQUIRED `[Channels]` section, and it looks like this: ```Text [Coordinates] ; Each entry:...

- xref: https://github.com/mne-tools/mne-bids/issues/1208 Add a `verbose` parameter to control what is being logged (DEBUG, INFO, WARNING, ...). Using: https://docs.python.org/3/library/logging.html

Add tests (CI) running Matlab/Octave for popular BV readers: FieldTrip, EEGLAB, Brainstorm

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Having such a CI can help us ensure that what we write is not only read by MNE-Python, but also the other important packages. This would be especially nice to...

A `.vmrk` file may look like this: ``` Brain Vision Data Exchange Marker File, Version 1.0 ;Exported using pybv 0.7.0.dev0 [Common Infos] Codepage=UTF-8 DataFile=mne_export.vhdr.eeg [Marker Infos] ; Each entry: Mk=,,,...

links in markdown codeblocks are being checked

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Hi, thanks a lot for your package! Using the up-to-date pip install of the package, the following URL is flagged when running from the command line: ``` `[[URL](URL)]` ``` this...

issue with CI and inspect module

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@drammock @hoechenberger I think this is the failure that threw me off recently: https://github.com/mne-tools/mne-bids/actions/runs/9106401009/job/25033546552#step:20:1185 > FAILED mne_bids/tests/test_inspect.py::test_inspect_single_file[True] - matplotlib._api.deprecation.MatplotlibDeprecationWarning: Auto-close()ing of figures upon backend switching is deprecated since 3.8 and...