Sanjay Curtis Nagi

Results 17 issues of Sanjay Curtis Nagi

This needs changing to 4 ideally as previous studies shown variant calling accurate above this level. already we have missingness filters high so this probably wont make much difference.

if you have two amino acids with same name (G454A), but in two different genes, it will fail.

STAR is probably better, and then it aligns with the parabricks workflow