sequencescape
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sanger
Web based LIMS
**User story** As a user in the Cardinal cell banking pipeline, I would like to be able to stamp a plate into a tube rack in the LIMS. Currently, these...
**Describe the bug** If sequencing requests in a batch are cancelled then this can be a bit tricky to spot, and the user is still propted to continue with the...
🗒️ Some quick and experimental work already done. Needs validation, but may be sufficeint. **Describe the Housekeeping** In Sequencescape we have a number of places where we handle proxy servers...
**Description** DPL-038 Understand - [ ] Handover of physical material and required ids from CGaP to Genomics - [ ] If require new pipeline in Genomics - [ ] Reporting?...
**User story** As an SSR I would like Sequencescape to prevent the upload of 'empty' multiplexed library manifests, as this is always an error. Eg RT711061 ** Background - Multiplexed...
**Describe the Housekeeping** The pipeline controller steps are a little convoluted. We should: - Avoid running everything via modules included in controllers - Instead behaviour should be encapsulated in separate...
**Describe the Housekeeping** Currently pipeline workflows are configured via the database. These would probably be better off in something like a yaml file. **Blocking issues** Describe any other issues or...
**Describe the Housekeeping** Currently flowecell message generation attempts to use one messenger class for *all* flowcells, including historic flowcells. We are probably better of switching to several messenger classes as...
**Description** Understand; - [ ] Handover of material and ids from CGAP - [ ] If new pipeline is required - [ ] Reporting **Who the primary contacts are for...
Data fix for https://github.com/sanger/sequencescape/issues/3203 Also consider Rich C's comment from email: > On a side note, regarding the list you sent of > What are your thoughts on this and...