Y24-332 - Fix typo in Sample Manifest column header

[harrietc52]

Describe the Housekeeping

Update the column header in sample manifests, from DATE OF SAMPLE COLLECTION (YYY-MM-DD) to DATE OF SAMPLE COLLECTION (YYYY-MM-DD).

This change would be across all sample manifest types Tests would need to be performed for existing sample manifests with the old text YYY, as well as new sample manifests with the new text YYYY, to ensure they are both supported.

Additional context

(Further information from Andrew)

See config/sample_manifest_excel/columns.yml in SS

The date_of_sample_collection column is defined twice with two different header texts:

date_of_sample_collection:
  heading: DATE OF SAMPLE COLLECTION (YYYY-MM-DD)
  unlocked: true
  validation:
    options:
      type: :custom
      formula1: 'IF(OR(EXACT(A1,"not collected"),EXACT(A1,"not provided"),EXACT(A1,"restricted access")), TRUE, AND((_xlfn.NUMBERVALUE(LEFT(A1,4))>0),OR(LEN(A1)=4,EXACT(MID(A1,5,1),"-")),OR(LEN(A1)<=7,EXACT(MID(A1,8,1),"-")),AND((_xlfn.NUMBERVALUE(MID(A1,6,2))>=0),(_xlfn.NUMBERVALUE(MID(A1,6,2))<=12)),AND((_xlfn.NUMBERVALUE(MID(A1,9,2))>=0),(_xlfn.NUMBERVALUE(MID(A1,9,2))<=31))))'
      allowBlank: false
      showInputMessage: true
      promptTitle: "Sample Collection Date"
      prompt: "Date should be in the format YYYY-MM-DD, Partial dates are supported. eg. YYYY or YYY-MM. See https://ena-docs.readthedocs.io/en/latest/submit/samples/missing-values.html if you can't provide a value."
      showErrorMessage: true
      errorStyle: :stop
      errorTitle: "Sample Collection Date"
      error: "Date should be in the format YYYY-MM-DD, Partial dates are supported. eg. YYYY or YYY-MM. See https://ena-docs.readthedocs.io/en/latest/submit/samples/missing-values.html if you can't provide a value."
  conditional_formattings:
    empty_mandatory_cell:
date_of_sample_extraction:
  heading: DATE OF DNA EXTRACTION (MM/YY or YYYY only) <--- different header
  unlocked: true
  validation:
    options:
      type: :textLength
      operator: :lessThanOrEqual
      formula1: "5"
      allowBlank: false
      showInputMessage: true
      promptTitle: "Sample Collection Date"
      prompt: "Please Enter either a Month and Year or a complete Year e.g. 04/05 or 2004."
      showErrorMessage: true
      errorStyle: :stop
      errorTitle: "Sample Collection Date"
      error: "This must be either a combination of month and year, or a whole year, with no spaces."
  conditional_formattings:
    empty_cell:
    len:
      formula:
        operator: ">"
        operand: 5

I think the way it works on upload is it looks for a column definition with a matching header, and uses that definition. So if you create 2 column definitions, one with YYY and one with YYYY, you could solve your issue that way. NB. I have had a silent error before where 2 different columns had the exact same header text, and it used the first it found in the list (the wrong column definition). So check for uniqueness of column headers if you change this file, or if you introduce a regex that ignores things in brackets.

NB. there's a copy in the spec directory too, update that if you change anything. spec/data/sample_manifest_excel/columns.yml