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GPL-743 Accept plate maps with barcode format GLAcccnnn

Open rl15 opened this issue 4 years ago • 4 comments

User story GPL-743 | As Lighthouse POC (Alan k) I would like to routinely accept plate maps for vaccine samples with plate barcode format GLAVAC001R

Who are the primary contacts for this story Alan K (PAM) Eduardo Rich L

Acceptance criteria To be considered successful the solution must allow:

  • [ ] Validate against barcode in format GLAcccnnnR (confirmed see comment of 18th Nov)

c= character and n = number

Additional context RT 705414

rl15 avatar Nov 16 '20 14:11 rl15

Barcode GLAVAC001R is not matching the regex

Added to support plates from Queen Elizabeth University Hospital as part of project Heron Expected formats: GLAnnnnnnR where n is a digit

class Glasgow < BaseRegExBarcode self.format = /\A(?GLA)(?[0-9]{6})(?R)\z/ end

Waiting for operations to confirm that is really whats on the plate NB It is whats being stored in LabWhere in Sanger > Ogilvie > AA315 > LH Drop Off > UK Biocentre box GSW 285

rl15 avatar Nov 16 '20 15:11 rl15

image001

rl15 avatar Nov 16 '20 15:11 rl15

Alan K wrote (Wednesday, 18 November 2020 at 14:06)

New barcode will be GLAcccnnnR where c= character and n = number.

rl15 avatar Nov 18 '20 14:11 rl15

I moved this to the sequencescape repo as I think the main (only?) changes needed will be in the 'foreign barocodes' section (barcode.rb and format_handlers.rb).

KatyTaylor avatar Nov 08 '21 11:11 KatyTaylor